PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007223.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 360aa MW: 40093.1 Da PI: 8.0669

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007223.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	25	79	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Rmu_sc0007223.1_g000004.1 25 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 79 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.3e-23	27	78	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Rmu_sc0007223.1_g000004.1 27 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 78 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MNSHESHRPM CVQGDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK ATPKTIMRVM 60 GVKGLTLYHL KSHLQKFRLG KQPHKEFNDH SIKDHASSLD LQRNSASSSG IIGRSMNEMQ 120 MEVQRRLHEQ LEVQKHLQLR IEAQGKYMQS ILEKACQTLA GENNMAAAAG SYKGNIGNNQ 180 GVNHADMGNL KDFNSPLNFP SFQDLNIYGS GDHLDQLQQN SLDRPPLDHH SFMPNNDNIN 240 CMGSKKRPSP YNSGNSSGKS PLIWSDDLRL QDLGTAASCL GPQDDHQIQI APPSIERGTD 300 QIESISDIYE SKPMIQGDEK KFEAGNKLER PSPRRAPMGS ERMNPMINAG VRQGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MNSHESHRPM CVQGDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK ATPKTIMRVM  60
GVKGLTLYHL KSHLQKFRLG KQPHKEFNDH SIKDHASSLD LQRNSASSSG IIGRSMNEMQ  120
MEVQRRLHEQ LEVQKHLQLR IEAQGKYMQS ILEKACQTLA GENNMAAAAG SYKGNIGNNQ  180
GVNHADMGNL KDFNSPLNFP SFQDLNIYGS GDHLDQLQQN SLDRPPLDHH SFMPNNDNIN  240
CMGSKKRPSP YNSGNSSGKS PLIWSDDLRL QDLGTAASCL GPQDDHQIQI APPSIERGTD  300
QIESISDIYE SKPMIQGDEK KFEAGNKLER PSPRRAPMGS ERMNPMINAG VRQGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-130	G2-like family protein