PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007332.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 472aa    MW: 51720.6 Da    PI: 5.9774
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007332.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.56.2e-33244298155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                +pr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl
  Rmu_sc0007332.1_g000003.1 244 RPRMRWTPELHERFVEAVKKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 298
                                59****************************************************8 PP
2Myb_DNA-binding54.52.7e-17246297148
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+rWT+e++e++v+avk+l g    t+k + + m+ +g+t +++ks++qky+
  Rmu_sc0007332.1_g000003.1 246 RMRWTPELHERFVEAVKKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 297
                                89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MSHHGVSSVS QSQTTKGITE SYCTSLSPVH DFLGCESEGR SSVARECSSA RLSPFIRTES  60
FSPPTNVRES SLQHSKSTFS RSSVFCTSLY QSSSSSSERQ LGNLPFLPHP PIYSQSISAV  120
DSKYPMLLSE DVSNQYDDEQ SDYLMKDFLN LTGDASDDSF HGIGRGGDTI ALTDQLEFQF  180
LSDQLDIAIT DNGENPRLDE IYEIPQASSK PAIELTCSKS CGSTAPPVDA LSSHPSPGPS  240
SAHRPRMRWT PELHERFVEA VKKLDGAEKA TPKGVLKVMN VEGLTIYHVK SHLQKYRLAK  300
YMPEKKEDKK ASSSEEKKAA ASGMESDGRR KGSFHITEAL RMQMEVQKQL HEQLEVQRSL  360
QLRIEEHAKY LEKILEEQQK AGSALLSPQA LSSLTTNSIK DPEQHPSPSA GVSPSQPPES  420
DSLSPLSLKH KAADCSDSGA QACTKKLRIE EKPDEPVVEN LSATVTTTTA SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.11e-113G2-like family protein