PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007406.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 132aa    MW: 15141.9 Da    PI: 4.8131
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007406.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.79.7e-12959247
                               SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
            Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                               ++WT+eE+e l+ +v+++G g Wk I +        ++R+   +k +w+ +
  Rmu_sc0007406.1_g000005.1  9 QKWTAEEEEALLAGVAKHGVGKWKIILEDSEfgpilTHRSNHKLKYKWRRW 59
                               79****************************999***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MEGECQEPQK WTAEEEEALL AGVAKHGVGK WKIILEDSEF GPILTHRSNH KLKYKWRRWS  60
VRPSGNSPFM ADEAAKEAQI VSDTEEEQRV SEMKEIQGVS ETKEMQRISK SAEDTESMLQ  120
LANEIYERCS RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.24e-13MYB_related family protein