PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007474.1_g000014.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 574aa    MW: 66398.2 Da    PI: 4.5441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007474.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.48.1e-25111431128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknrat 78 
                                lp Gf+F Pt+eel+ +yL +kv+gk+++ ++  ++e+++yk+ePwdL +     ++ ++ ++++ F++ +k + +g++ +r++
  Rmu_sc0007474.1_g000014.1  11 LPSGFKFLPTNEELLGYYLLNKVRGKPFKYDSRvMNEFNLYKTEPWDLWTrfggpRL-NQGEDLFIFTELKKVNDNGSNVSRTA 93 
                                699************************88865549*************753455433.356799******************** PP

                        NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 sg+Wk      +v+++  k++  g  k + +  + +p+ e+ +W+m ey+l
  Rmu_sc0007474.1_g000014.1  94 GSGTWKGDTAGAKVYDSedKKKILGSWKRFHYVPN-EPN-ENGSWIMFEYKL 143
                                ******99999999998666666899999999854.444.599*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MASSCVPGLN LPSGFKFLPT NEELLGYYLL NKVRGKPFKY DSRVMNEFNL YKTEPWDLWT  60
RFGGPRLNQG EDLFIFTELK KVNDNGSNVS RTAGSGTWKG DTAGAKVYDS EDKKKILGSW  120
KRFHYVPNEP NENGSWIMFE YKLDDSLIPK SCIGRDLVLC RIRKDRKRKL IEDQMNDTPQ  180
SSRRKVPRVD KHDVMFTHGK HIMNDDTNLP ASFTQGLGSE DEEQQSQQRQ QLDSNKSFEE  240
QEIQQEDPQP RRQHSHFNEQ QQQLLVNDLM ISSDHYIFQR GETYDPMNIV RPNPNAVISH  300
QQNNLGIPSY FHEQQQQLLS DDLMVSCHLD KFQRVDKHES YVMYTCENQI LNDEDYNLMA  360
SSVTRWLSSD EEKQHPQQQQ EVEPNNMCAG QHSSVSFERE EQQLQQQDQQ LLPSTSDCHE  420
KQQQLLGNDL MVCSDHDIFR RAETYEPMNV QPNPDTLISH QPNHLSIPID IDAIQFDDYW  480
TPNELLLVDT NNDPYTAVPD SVLDTSKPLQ MQDSAANDNN EMMRIDESHG QTQLGFPHDS  540
NTTELSDSAA HNEALNFSTL DDNVFNVIDL DNLW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163170RKDRKRKL