PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007525.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 224aa    MW: 25783.6 Da    PI: 5.6308
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007525.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.4e-141663148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g W + Ed++ +d+vk++G g W + +r+ g++R++k++++rw++yl
  Rmu_sc0007525.1_g000007.1 16 KGVWAASEDQIVKDYVKKHGVGKWGKLSRETGLKRCGKSVRLRWLNYL 63
                               789*******************************************97 PP
2Myb_DNA-binding28.92.7e-0969105146
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                rg+ T++E+el+++++k+lG++        ++ gRt++++k++w++
  Rmu_sc0007525.1_g000007.1  69 RGNITEDEEELIIRLHKLLGNR--------IP-GRTDNEIKNYWNS 105
                                7999****************99........**.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGESSTCYDK NEGPKKGVWA ASEDQIVKDY VKKHGVGKWG KLSRETGLKR CGKSVRLRWL  60
NYLRPGIVRG NITEDEEELI IRLHKLLGNR IPGRTDNEIK NYWNSRLKRK LQQQNHLEVP  120
EVPRNKEIRE DLSSSAAVAA AAEKNPHLTG NNVNEDEDYH QHHDVDFGVG IEFEATDNNN  180
GTGDDEHLRD DLWWNNFIMD LNDIQLDASE FQPDFPEIRL GNLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-44MYB family protein