PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007537.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 212aa    MW: 23791.4 Da    PI: 4.525
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007537.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.45.9e-1447107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                 R+t+t++ql++L+el++    r  + e+++e+   l    +++ ++V++WFqN +a+e++
  Rmu_sc0007537.1_g000001.1  47 YRWTPTPDQLRILQELYYDkvLRSSTPEQIQEICLYLqqygQIEGKNVFFWFQNLKARERQ 107
                                6****************965799************************************97 PP
2Wus_type_Homeobox90.91.3e-2946108364
          Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                + RWtPtp+Q++iL+ely+ + lr+ + e+iq+i   L++yG+ie+kNVf+WFQN kaRerqk
  Rmu_sc0007537.1_g000001.1  46 NYRWTPTPDQLRILQELYYdKVLRSSTPEQIQEICLYLQQYGQIEGKNVFFWFQNLKARERQK 108
                                68***************987889***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MEPRTLQLME LETQQQMELQ AQQPTEEGGS IQAAGSSANK PIRPTNYRWT PTPDQLRILQ  60
ELYYDKVLRS STPEQIQEIC LYLQQYGQIE GKNVFFWFQN LKARERQKLR EYRNVPVGGS  120
LDLNFGSTSS TSTDRSIDLN FGSRVGYGAD GSIMEQRGEY HQEIETLPLF SMHGEDILGN  180
MKTTSEGGGG YGGGSRISLE LSLNSYGDAD MA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-26WOX family protein