PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007700.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 102aa    MW: 11703.3 Da    PI: 8.6574
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007700.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.11e-37898192
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
                               lppGfrFhPtdeelv++yL++k++++++++  +i+e+d+yk++Pw+Lp  +  +ekewyfFs+rd+ky++g+r+nra+ sgyWkat
  Rmu_sc0007700.1_g000001.1  8 LPPGFRFHPTDEELVKHYLCRKCQSQPISV-PIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKAT 92
                               79****************************.88***************6555679******************************* PP

                        NAM 87 gkdkev 92
                               g dk++
  Rmu_sc0007700.1_g000001.1 93 GADKPI 98
                               ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MSSSELQLPP GFRFHPTDEE LVKHYLCRKC QSQPISVPII AEIDLYKYDP WELPGLALYG  60
EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGL PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-66NAC family protein