PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007728.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 279aa    MW: 31149 Da    PI: 7.1613
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007728.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.92.7e-11146241285
                                EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHH CS
                         B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvka 71 
                                +k+lt sd ++++rl +pk+ +++h            ++++ +k++t++d++     + ++++   ++s++yv+ ++W e vk 
  Rmu_sc0007728.1_g000010.1 146 KKKLTLSDLGNLSRLLVPKEMVKNHvlphvngdfvqRLESKAGKQVTVKDSDKeteHQLTFRY--LRSSKSYVFNGNWMEIVKG 227
                                589999************************999999555557788999997666456666666..******************* PP

                                HT--TT-EEEEEE- CS
                         B3  72 ngLkegDfvvFkld 85 
                                 +Lk  D + ++ d
  Rmu_sc0007728.1_g000010.1 228 RDLKKDDEIGLYWD 241
                                ******98888854 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEEKPSKTLN LIDKLMHAAE SPSTASSSRT STAGDNQRLC DAATALTLHQ SWLQPASTTN  60
KRKAKAPVIP EEEDRIEKPA APTNLKHQKL VLSDHENMEP KTKSDPVAEC DDAQNLHTLT  120
EGSARPSAHH HIDEQVARDP ALYKIKKKLT LSDLGNLSRL LVPKEMVKNH VLPHVNGDFV  180
QRLESKAGKQ VTVKDSDKET EHQLTFRYLR SSKSYVFNGN WMEIVKGRDL KKDDEIGLYW  240
DTLNSNFHFS LLKLASQESQ AADEVTRACS STVTSSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.12e-13B3 family protein