PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007737.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 223aa    MW: 24227.8 Da    PI: 4.7965
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007737.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.5e-13159204655
                                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +++Er RR ri +++ +L+el+P+     +k  + a++L +AveY+k Lq
  Rmu_sc0007737.1_g000003.1 159 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 204
                                689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MQPAPGESGG EVTRGGGGLG RFCSAPASWL EALLEDEEED PLKPTQCLTD LLAENCEGPS  60
STAVGFGSDT TADPAAAFLR QNSSPADFVG NSSDGSEGYF SGFGIPTSLD YVSNPNFSNV  120
SSSSANKRVR DVKMEEGGFE ESGTLRVRAK RGCATHPRSI AERVRRTRIS DRIRKLQELV  180
PNMDKQTNTA DMLDEAVEYV KFLQKQIQEL SEHQRRCKCI GKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-53bHLH family protein