PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007784.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 96aa    MW: 10824.4 Da    PI: 6.5097
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007784.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.42.3e-09546140
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiy 40
                               +p+G+rFhPtdeel+ +yL  k ++   +++    ++e+d+y
  Rmu_sc0007784.1_g000006.1  5 VPVGVRFHPTDEELIEHYLYLKNNHGLASATPsLlLPEFDLY 46
                               599****************99987765333221236666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MDHYVPVGVR FHPTDEELIE HYLYLKNNHG LASATPSLLL PEFDLYGGES VEALEASSEI  60
FSGRGRTVYK TFRMSCIVFR ALASKGMLND IKKASW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.16e-09NAC family protein