PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007820.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 195aa    MW: 22516.2 Da    PI: 6.2946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007820.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-182373155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               + y+GVr++  +++Wv+e+r+p   +k++r++lg++ t e+Aa+a++ a+++l+g
  Rmu_sc0007820.1_g000002.1 23 PVYRGVRRRN-NNKWVCEVREP---NKKTRIWLGTYPTLEMAARAHDVAALALRG 73
                               68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MILASSRPKK RAGRRVFKET RHPVYRGVRR RNNNKWVCEV REPNKKTRIW LGTYPTLEMA  60
ARAHDVAALA LRGKQACLNF ADSVWRLPIP ASKDQLDIRR AAAEAAETFR PEEFGGVSSS  120
CDDNEREYED ENVEMDNEKK NDGFYEDKEA LFDMPRLLTS MAEGPLLSPP RHYLDSMNWA  180
DDQVDSESNF SLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-53ERF family protein