PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007869.1_g000021.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 81aa    MW: 8676.09 Da    PI: 10.4875
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007869.1_g000021.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.8e-082264343
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43
                               +W + Ed  l++a k ++++   +W++Ia+ ++ g+t   c  r
  Rmu_sc0007869.1_g000021.1 22 SWAATEDIALLNALKAFPKDvsmRWEKIAAAVP-GKTKAACMKR 64
                               6999*****************************.*******887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MGPLVRTGNY QSLEHGKSGG VSWAATEDIA LLNALKAFPK DVSMRWEKIA AAVPGKTKAA  60
CMKRVAELKK GFRSAKAATE E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-27MYB_related family protein