PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007877.1_g000016.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 286aa    MW: 33625.3 Da    PI: 6.6045
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007877.1_g000016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.4e-101532103796
                                EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                + +d++ r+W v+l +r + ++++l++GW +F ++n+L  ++ v F +d+ ++++ +v++
  Rmu_sc0007877.1_g000016.1 153 KWRDRTMRRWAVRL-FRDGASSFWLREGWVRFYEDNNLGNNELVEFIFDE-KTGNANVTI 210
                                4579999*******.7888889*************************876.666667765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDDYWYLLVM DLHEKEAILW DSYPDPNSVG RRMHHARDVK VFSCEMTMFG NVYYHFPSFP  60
ITLAEGNPTN PQTFDSGIFD IRHMQHYLDP WSIGFISEDQ RNRVALEIVQ SPRNEHRRVV  120
LAAAVGVSIG STHMGAKNAF SPPTRRKCRS HRKWRDRTMR RWAVRLFRDG ASSFWLREGW  180
VRFYEDNNLG NNELVEFIFD EKTGNANVTI VVPVDEVVNY ALNTEDEMGC DIYDNQAMQL  240
MRPVVVVFIV FRGLLYIYRM QNISSFIVKR YLNVEYYNVT IIDPEL