PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008051.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 202aa    MW: 22089.3 Da    PI: 6.7652
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008051.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.6e-05176198123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                ++C+ C+k F +   L+ H  +H
  Rmu_sc0008051.1_g000007.1 176 FPCGFCKKKFGTAGALQAHKAKH 198
                                89******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MASKSESVSV SKDETAVNAK MVGPEKLEMA SKSESASVSK DEVSNVVDAL VQKVKFNYNK  60
LKSQDVEFTL EEYSEVVGKL ACFMAEDECV PISMLSLVLF PDPLSRSMAV DDIRHFVGKL  120
LFLQDIDGPE KDLLSFPLWK EDVVRVGEYC EKNLAASKKG KKDATTSSST FSSQAFPCGF  180
CKKKFGTAGA LQAHKAKHGT NK