PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008079.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 178aa    MW: 21120.2 Da    PI: 7.0522
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008079.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.41.1e-091098184
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratks 80
                               l pG rF P ++elv +yLk+ ++g+k++  ++ + ++d+y + ePw++ k    k++a e++    +++++ + +   ++r+ ks
  Rmu_sc0008079.1_g000011.1 10 LLPGERFCPMEDELVLFYLKPMLNGEKVPGRNFvVFDCDLYGHqEPWEIWKtrrpKLEA-EQRPLLLHPTQEDEFHRLTSKRTQKS 94
                               579************************99988769999***8879****6334333333.23346777777777777777776666 PP

                        NAM 81 gyWk 84
                                 W+
  Rmu_sc0008079.1_g000011.1 95 WNWH 98
                               5665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEESSQGHHL LPGERFCPME DELVLFYLKP MLNGEKVPGR NFVVFDCDLY GHQEPWEIWK  60
TRRPKLEAEQ RPLLLHPTQE DEFHRLTSKR TQKSWNWHLE WRRLWQASEI FGDRSCGWLK  120
EKVFLQECSF CAPRPTKAVE WCEGCETLGR GDEIAGGTCM VGLFKRRENC FLYQRARA