PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008192.1_g000020.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 189aa    MW: 20016.1 Da    PI: 5.9239
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008192.1_g000020.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.7e-182372255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  Rmu_sc0008192.1_g000020.1 23 TYRGVRRRS-SGKWVSEIREPK----KpNRIWLGTFSTPEMAAVAYDVAALALKG 72
                               69****888.8*********94....468***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MQYTTNSSES SSSSSTGPGR HPTYRGVRRR SSGKWVSEIR EPKKPNRIWL GTFSTPEMAA  60
VAYDVAALAL KGQDAELNFP NSASSLPVPA SNSSRDIQAA ATSAAAAIGA AAAAMGVGNG  120
ATSTRSSTES GHGHVLNDHE FIDEDLIFDM PNVLRNMAEG MLLSPPRLDI AGDHDAFAAE  180
EHGNLWKFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-46ERF family protein