PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008280.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 166aa    MW: 19087.6 Da    PI: 4.8332
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008280.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox45.31.5e-1447107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++ + l++    + p+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0008280.1_g000010.1  47 NRWTPTPDQLRIVQVLYYDkvLKCPTPEQIQEICLQLqqygQIEDKNVFFWFQNLKARERQ 107
                                7****************96579*************************************97 PP
2Wus_type_Homeobox92.83.2e-3045108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++i + ly+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0008280.1_g000010.1  45 TNNRWTPTPDQLRIVQVLYYdKVLKCPTPEQIQEICLQLQQYGQIEDKNVFFWFQNLKARERQK 108
                                679***************9868899**************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT PTPDQLRIVQ  60
VLYYDKVLKC PTPEQIQEIC LQLQQYGQIE DKNVFFWFQN LKARERQKLK EFRNVREIET  120
LPLFPMHGED IFGNMKTTSE GGSGYGGGFR ISLELSLNSY RDADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-17WOX family protein