PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008339.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 256aa MW: 28917.2 Da PI: 4.751

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008339.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+ +++ +G g+W++ +++ g+ R++k+c++rw +yl Rmu_sc0008339.1_g000020.1 14 KGPWTTEEDQILISYIQNYGHGNWRALPKHAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.9	1.7e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l Rmu_sc0008339.1_g000020.1 67 RGNFTREEEDAIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MVRAPCCEKM GLKKGPWTTE EDQILISYIQ NYGHGNWRAL PKHAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TREEEDAIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLLKHN 120 NTTSPTCSTS NLTSRYAEPE GVNFESPTSH ASMSPQPSSS DDFSSVTEAS AATGQNMIKD 180 EKIELDASFL EIDDSFWSEA LSADNSGDNQ LEFLEGTNDQ AELQLLLPSN IDDGMDFWYD 240 LFIKAGYGDT PELPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-82	MYB family protein