PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008355.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 190aa MW: 20740.8 Da PI: 9.1229

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008355.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.4	6.5e-05	30	62	2	32
T--SS--HHHHHHHHHHHHH..SSS--HHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeeree 32 ++R++++ +q+++L+el+++ r p+ +++++ Rmu_sc0008355.1_g000007.1 30 STRWAPSYDQIRILKELYYNegVRSPTVDQKQK 62 58****************976789999988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEPQTQQQTE DGGSNKATKS SANMLGRRSS TRWAPSYDQI RILKELYYNE GVRSPTVDQK 60 QKKKRFTSDV HVPMQRSGLV GNGNGTNWKP ENQYINFGSS VSASASSAGV MIAFNGQMGN 120 YGGYGSMNME IETLPMFLMH GEDIFGNTKT TSEGGGSYSY YSGGWGGYNS GSHISLELSL 180 NSYGSTLFSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-11	WOX family protein