PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008447.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 74aa    MW: 8434.95 Da    PI: 10.5929
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008447.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.11.2e-231359248
                               ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
                     SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                               +i+n   rqvt+skRr g+lKKA ELSvLCd e +viifs tgkl e
  Rmu_sc0008447.1_g000001.1 13 KIDNLPARQVTYSKRRRGLLKKAGELSVLCDCEFSVIIFSATGKLCE 59
                               799999***************************************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MMKRTGKKIK IEKIDNLPAR QVTYSKRRRG LLKKAGELSV LCDCEFSVII FSATGKLCES  60
SSSRYFSTSS FFLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.15e-22MIKC_MADS family protein