PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008509.1_g000026.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 261aa MW: 28212.2 Da PI: 5.3334

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008509.1_g000026.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.6e-09	65	109	17	57
HHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 17 elFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 + F+ ps e+++e+ +l ++++++V++WFqN +a e++ Rmu_sc0008509.1_g000026.1 65 RRFNLRDRPSNEQIQEICLHLkpygQIEDKNVFFWFQNLKAGERQ 109 57899999*******************************998885 PP
2	Wus_type_Homeobox	55.6	1.2e-18	72	110	26	64
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 P++e+iq+i +L+ yG+iedkNVf+WFQN ka erqk Rmu_sc0008509.1_g000026.1 72 RPSNEQIQEICLHLKPYGQIEDKNVFFWFQNLKAGERQK 110 69************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MSVLIRDKPM YSPPARLIAS VIYGSQIYFR LKLFATAPRD SSGPLTRSPR ANSLSVFSGD 60 FNPTRRFNLR DRPSNEQIQE ICLHLKPYGQ IEDKNVFFWF QNLKAGERQK LKEFRNIRVG 120 GSLDLNFGST SSTDDGRSID LNFGSTGSTC DDGSIDLTLG SCVVYGVDPY SSSPFNANIS 180 TTSFGPTGGQ SSMEQRGGDH QEVETLPLFP MHGEDVLGNP NTTSKEGSAY GYYSGGSGGY 240 NSGSPVSLEL SLNPSGAADL A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	7e-13	WOX family protein