PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008529.1_g000015.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 206aa    MW: 22540.1 Da    PI: 5.1695
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008529.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-19108158155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f t+eeAa+a++  + +++g
  Rmu_sc0008529.1_g000015.1 108 SKYRGVRQRP-GGKWAAEIRDPR----RtVRVWLGTFQTEEEAARAYDTKAVEFRG 158
                                89********.9*********83....46**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MWISSSQLHS DSKMKSSGSK MPKEQEHAII VSALKRVIRG GVGTNNAPSQ PPPPPTHLPE  60
TGGSDQIVIQ FSDCDDTCQV CNMEIDHCLG CGLFPPSEQD KGKKVKTSKY RGVRQRPGGK  120
WAAEIRDPRR TVRVWLGTFQ TEEEAARAYD TKAVEFRGAD RAKLNFPPSS DTGTTSGAMT  180
DETKVQTSPV GESSTAEEEE EEEMDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.13e-27ERF family protein