PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008577.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 216aa    MW: 24309.2 Da    PI: 9.6169
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008577.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.5e-17241445
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
            Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                               W++eEd++l++++kq G++ W+ Ia++++ gRt++ +k++w+
  Rmu_sc0008577.1_g000004.1  2 WSEEEDKILIEVHKQIGNR-WAEIAKRLP-GRTENTIKNHWN 41
                               *******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MWSEEEDKIL IEVHKQIGNR WAEIAKRLPG RTENTIKNHW NATMRKRYLK RKLTTSINRN  60
IKDSSASYIN ESTVLSNYIK SVVKSSAAAS AEKKKGKTAV VYGEQSSLQN LPETDVYHPQ  120
FEKGNGAMVY GEQSTSLHDL PMSEVYRPQF EPSSYNMEWA ASVAAPAAMN ANKQLNNSRV  180
EATMGSSSSY LSSNRTMYPE FYGYGNGAEK LDKTPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14553RKRYLKRKL
24654RKRYLKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-24MYB family protein