PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008577.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 250aa    MW: 27784.4 Da    PI: 9.8359
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008577.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.5e-18241445
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
            Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                               W++eEd++l++a+kq G++ W+ Ia++++ gRt++ +k++w+
  Rmu_sc0008577.1_g000008.1  2 WSEEEDKILIEAHKQIGNR-WAEIAKRLP-GRTENTIKNHWN 41
                               *******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MWSEEEDKIL IEAHKQIGNR WAEIAKRLPG RTENTIKNHW NATKRKRYAK RKLTSTINLN  60
VKESSASIPI NESTLLSKYI KSMARSSATA SAEKKKGKSA VVSGESSPQS LAESDVYRPQ  120
LEKGKIAVVN GDKSTSLHDL PESEVYRPQF ETSHYDMEWA ASVAAAAAVN ANKQLNNSSV  180
AATMGSISSY ISSDRTMYPE FNGYGNGSHT GMQTKDKVRL SLEMNCLMQE QAHLKKPDVD  240
LMEMIRGTRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14553RKRYAKRKL
24654RKRYAKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-27MYB family protein