PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008603.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 171aa    MW: 18589 Da    PI: 8.3137
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008603.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-172069255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  Rmu_sc0008603.1_g000012.1 20 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 69
                               69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEGQEAAAAA NRKRGENDKP YKGIRMRKWG KWVAEIREPN KRSRIWLGSY STPVAAARAY  60
DTAVFYLRGP SARLNFPEAL PVVGGGCGCD GDMSAASIRK KATEVGARVD AVETAMRQHR  120
AAAAGGPMEE MKPCRAVSAE EESGFVDRVD LNKMPDPEET DAGVVCDWGR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.14e-58ERF family protein