PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008608.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 243aa    MW: 26579.9 Da    PI: 4.2958
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008608.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.46.9e-153391557
                               SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  5 ttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +t+t++q ++L+el++    +yp+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0008608.1_g000007.1 33 WTPTPDQPRILQELYYDkvLKYPTPEQIQEICLHLqqygQIEDKNVFFWFQNLKARERQ 91
                               99*************96679*************************************97 PP
2Wus_type_Homeobox85.94.3e-283092364
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++ WtPtp+Q +iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0008608.1_g000007.1 30 NNWWTPTPDQPRILQELYYdKVLKYPTPEQIQEICLHLQQYGQIEDKNVFFWFQNLKARERQK 92
                               677**************99688999*************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MELRTQQQIE DEGNNQAAGS SANTPIRQTN NWWTPTPDQP RILQELYYDK VLKYPTPEQI  60
QEICLHLQQY GQIEDKNVFF WFQNLKARER QKLRLIQNVR VGGSLDLNFG STSSTDDGRS  120
IDLNFGSTGS TGTDGPIDLN FGSCVGYGVD PYSSSPFNAN TSTTSFGTTG GQSFLEQRGG  180
DHQEVETLPL FPMHGENVLG NPKTTSEEGS AYGYYSDGSG GYNSGSPVSL ELRLNPSGAA  240
DLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-24WOX family protein