PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008667.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 166aa    MW: 18616.1 Da    PI: 5.305
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008667.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.0006824443454
                               TTS-STCHHHHHHHHHHHHHH CS
                        HLH 34 pskKlsKaeiLekAveYIksL 54
                               +s+  sK++i   Av YI++L
  Rmu_sc0008667.1_g000019.1 24 NSPAHSKSSIILDAVTYIQEL 44
                               56669**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MVSKQVPKRD PVYKKLQSLR SISNSPAHSK SSIILDAVTY IQELKRKVEE MNQEIVAARA  60
QVSAPAQNPF PMQLKVEPRE EDQAGFQIKM FTEKSCSGLL VFVLEAFEEL GLDVHQARVS  120
CSNNFLLEAV ATINNDDQNG DDHNKDAEVV RKAMLQAIQS WSEVSQ