PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008668.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family SBP
Protein Properties Length: 215aa    MW: 23377.3 Da    PI: 9.0426
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008668.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP70.24e-22165212148
                                --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
                        SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                                +CqvegC++ l +akeyhrrhkvCe+hska++v+v gleqrfCqqCsr
  Rmu_sc0008668.1_g000012.1 165 RCQVEGCHVALVSAKEYHRRHKVCEMHSKASKVVVLGLEQRFCQQCSR 212
                                6**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MFGHNIGGRS GQNGNNANLA WDIWEMNNSN NNGNNDILYM TAATAAVTIA EPPSGSSASS  60
EASLGHPLVH NNNGVQAVQQ HFQNLYGGDH HQSRLRGSQY LPDPHLMCLK LGKRHYFEDA  120
PLPLLDHRDV AGFPLAVGGM KRGKNMYGAG SRGGGASTQS LKVPRCQVEG CHVALVSAKE  180
YHRRHKVCEM HSKASKVVVL GLEQRFCQQC SRSVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27370.33e-24SBP family protein