PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008698.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 191aa MW: 21428.8 Da PI: 9.6678

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008698.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	98.1	1.6e-30	130	190	2	62
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikel 62 + +kdrhsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++WL+++ak+ai el Rmu_sc0008698.1_g000010.1 130 TDRKDRHSKVCTTKGPRDRSIRLVAHTAIQFYDMQDRLGYDQPSKVVDWLIKKAKAAINEL 190 679*******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MSSISRYSLY ASLCPQAETI VRSKMAWIYG QQRNVSAQLL RLFFHDCFIE IQILLLVRFL 60 PPIADQTPPL RLNPPSCTID VSGSPNFKSY SKLKLCIKAS PLTPSSSSPT ASSSTASEIV 120 EAQCHILRAT DRKDRHSKVC TTKGPRDRSI RLVAHTAIQF YDMQDRLGYD QPSKVVDWLI 180 KKAKAAINEL D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	1e-35	TCP family protein