PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008767.1_g000014.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 100aa    MW: 11690.4 Da    PI: 4.4288
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008767.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.81.2e-1232601442
                               HHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
                     SRF-TF 14 skRrngilKKAeELSvLCdaevaviifss 42
                                kR++g+lKK +E+ +LCd+++a ii+s+
  Rmu_sc0008767.1_g000014.1 32 GKRKEGLLKKVYEITTLCDIKAAAIIYSP 60
                               69**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MKTISREEAA EPEEELGVIE KRECGAEEWD LGKRKEGLLK KVYEITTLCD IKAAAIIYSP  60
FDFELEVFPS HFEVHEMLMR FQDMSEKDKT KNMVNQEAFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.25e-17M-type_MADS family protein