PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008851.1_g000013.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 184aa    MW: 20032.3 Da    PI: 10.562
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008851.1_g000013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.63.3e-231360249
                               ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                     SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                               +i+n   rqvtfskRr g+lKKA ELSvLCd e aviifs tgkl+e 
  Rmu_sc0008851.1_g000013.1 13 KIDNLPARQVTFSKRRRGLLKKAGELSVLCDCEYAVIIFSATGKLFES 60
                               6899999**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MSKPTREKIK IRKIDNLPAR QVTFSKRRRG LLKKAGELSV LCDCEYAVII FSATGKLFES  60
SSSSSARIGR VPPSSLASLS LSLSLSPAWS THTTSSLELS KSNLATIGIY LLQTFSAPSW  120
LASVEAYVLS DRLPLDVQPC VAPLAVLCCG GSSRPRLARL KGSGVMTMAL ADLGRSWWAR  180
WETW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-25MIKC_MADS family protein