PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009036.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 191aa    MW: 20827.4 Da    PI: 6.8804
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009036.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.8e-091544130
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                               rgrW +eEd++l   v+q+G g+W++ +++
  Rmu_sc0009036.1_g000001.1 15 RGRWVPEEDKKLFAFVQQHGHGSWNSLPQK 44
                               89***********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MGKQSHTVAS PGIRRGRWVP EEDKKLFAFV QQHGHGSWNS LPQKAAKARF SRQSKPLISH  60
DQPPRFEPVP VPQCLDMNER AREILLLLKS ILAADSGAQL GGGIGSTAAH VGQEVASLGK  120
VDVESVLANC DQFEAPRTST SVLGFDEVFG ESGTNNDYGE LLEALLQHNH NSTGFEVKDA  180
WSLEQRVKAK C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.15e-12MYB family protein