PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009049.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 187aa MW: 22211.1 Da PI: 8.78

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009049.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.3	4.4e-16	26	101	23	99
.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 23 aeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++eh +++ e tl+le +s sW+v + rk+++ +++++GW+eF ++n L +++f+vF +dg+++f vk+f+k Rmu_sc0009049.1_g000001.1 26 TTEHlyiakDLS--ERATLKLERSSECSWSVIV--RKSGRDVYFKDGWQEFLRDNSLGDKEFLVFIYDGKMRF--SVKIFNK 101 445556643333..5569*************..*******************************99999..9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MGRKILRKVT EKKRPTFFQL IHPRLTTEHL YIAKDLSERA TLKLERSSEC SWSVIVRKSG 60 RDVYFKDGWQ EFLRDNSLGD KEFLVFIYDG KMRFSVKIFN KNGCERMDFH NIKAHQNSTV 120 SKSTKRPRGR PRKCSKANSA DKEVKEVEEE EEEEEDYNDN PAQEYAELFE SEIRQFTSAI 180 YVHLTMW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	133	KRPRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09780.1	1e-13	B3 family protein