PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009130.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 216aa    MW: 24823 Da    PI: 6.3979
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009130.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.87e-2284139156
                                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                   Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                +++ +++t++q++e+e+lF+++++p+ ++r++L+  lgL+ rqVk+WFqNrR+++k
  Rmu_sc0009130.1_g000001.1  84 KKRYHRHTAHQIQEMENLFKECPHPDDKQRQKLSLDLGLKPRQVKFWFQNRRTQMK 139
                                688999***********************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSTMGGGNVV NSETLFSSPM QNPNFNFMPF QPFSSILPKE ETGLMTRGKE EMMESGSGSE  60
HAEEKYSGNE QETEEQLQQQ PPKKKRYHRH TAHQIQEMEN LFKECPHPDD KQRQKLSLDL  120
GLKPRQVKFW FQNRRTQMKA QQDRADNVML RAENDTLKNE NYRLQAALRN IICPNCGGAA  180
MIGDIALDEH QLHLENARLR EEVCNSIVAM AGNCIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.16e-57HD-ZIP family protein