PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009205.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 226aa    MW: 25090.9 Da    PI: 4.784
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009205.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.34.1e-1645105357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++L+el++    + p+ e+++e+  +l    +++ ++V++WFqN +a+e++
  Rmu_sc0009205.1_g000017.1  45 NRWTLTPDQLRILQELYYDkvLKSPTPEQIQEICLHLqqygQIEGKNVFFWFQNLKARERQ 105
                                7****************96679*************************************97 PP
2Wus_type_Homeobox91.29.6e-3043106264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWt tp+Q++iL+ely+ + l++P+ e+iq+i  +L++yG+ie+kNVf+WFQN kaRerqk
  Rmu_sc0009205.1_g000017.1  43 TNNRWTLTPDQLRILQELYYdKVLKSPTPEQIQEICLHLQQYGQIEGKNVFFWFQNLKARERQK 106
                                579***************986889***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MLSAIACLSQ LLETRLLQAQ QPTEEGGSTQ AAVSSANTPI RPTNNRWTLT PDQLRILQEL  60
YYDKVLKSPT PEQIQEICLH LQQYGQIEGK NVFFWFQNLK ARERQKLREF RNVPVGGSLD  120
LNFGSTGSTS TDRSIDLNFG STGSTSTNRS IDLNFGSRVG YGVDGSIMEQ RGEYHQEIET  180
LPLFPMHGED IFGNMKTTSE GGSDYGGASH ISLELSLNSY RDADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-25WOX family protein