PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009248.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 284aa    MW: 32171.5 Da    PI: 9.9912
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009248.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.53.7e-161372111596
                                -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                 + lp +f+e+h ++k ++ +l+lede+g++++ k+i ++++    l++GW++F+ +++L++gD +vF+l++ ++f  ++ +
  Rmu_sc0009248.1_g000006.1 137 SMGLPSNFCETH-LPKSSDSELILEDEDGNVYDAKYIAKRTG----LSGGWRGFALEHKLDDGDALVFELVEPTRF--KIYI 211
                                489******999.45567779***************655555....***********************9987777..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MVAAYEEARN KRLEENKKKF QDLGITQVSK TLSDLTASEK KPQQRAWKPK AKNTAFEVEP  60
RRSTRQRNPI QTYVDDVDIG LPTRKRLRSS SSSFGSYLAR PLEECRMASY EERSAAFKAA  120
EQLQESLQSE NPSFVKSMGL PSNFCETHLP KSSDSELILE DEDGNVYDAK YIAKRTGLSG  180
GWRGFALEHK LDDGDALVFE LVEPTRFKIY IVKVTNQEHC KKDKVKSAGK PSKAAKKPDQ  240
DSNKKQRSKK ATTAEIIDMK TPPELLPESP KSEAVLPYRL RKRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-58B3 family protein