PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009380.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 249aa MW: 27513.6 Da PI: 7.6629

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009380.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45	1.8e-14	30	91	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+ +t++ +++L+elF++ r p+ e+ +++ +l +++ ++V++WF N+Ra+ek+ Rmu_sc0009380.1_g000006.1 30 NTRWIPTTDHIRILKELFYNkgVRSPTVEQVQRICLQLkwygKIEFKNVYYWFVNQRAREKQ 91 58***************7789***********************************97 PP
2	Wus_type_Homeobox	85.5	5.9e-28	29	92	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW Pt++ i+iL+el++ +G+r+P+ e++qri +L+ yGkie kNV+yWF N++aRe+qk Rmu_sc0009380.1_g000006.1 29 SNTRWIPTTDHIRILKELFYnKGVRSPTVEQVQRICLQLKWYGKIEFKNVYYWFVNQRAREKQK 92 689************98769***************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MEPQNRHPTE DGGSNKAAGS SANMLRRKSN TRWIPTTDHI RILKELFYNK GVRSPTVEQV 60 QRICLQLKWY GKIEFKNVYY WFVNQRAREK QKMRSTSDVH VPMQRSGLVG DDNVTNWKHE 120 DQYINFGSST PASASSAGVM IAFNGQMGNY SGYGSMNMEK SVMDCSISAG GGTSSTVFDM 180 NVEQTFMEQG GEDHQEIETL SLFPVHGDDI FGNMKTTSDG GGGHGGGSHT SLELSLSCEG 240 KAGKSFRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-29	WOX family protein