PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009409.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 90aa    MW: 10422.6 Da    PI: 6.7303
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009409.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-121873358
                               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
                               ++k+ +++q+N e+A r R +K+++++eL+e++ +L+  N++ ++ ++   k +++
  Rmu_sc0009409.1_g000004.1 18 DDKKRKKMQSNCESAWRPRMKKQKRVDELTEEISQLQISNSQIRQSIDANDKAYSE 73
                               689*******************************************9998888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MSSVQRQSSS DSDGSVVDDK KRKKMQSNCE SAWRPRMKKQ KRVDELTEEI SQLQISNSQI  60
RQSIDANDKA YSEVEAWINV MRAQEKELTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12024KKRKK
23443RPRMKKQKRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.19e-13bZIP family protein