PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009474.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 296aa    MW: 33206.3 Da    PI: 9.9865
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009474.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.79.5e-3277130255
                    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                 rlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Rmu_sc0009474.1_g000002.1  77 SRLRWTPDLHLCFIHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130
                                69***************************************************7 PP
2Myb_DNA-binding51.22.9e-1678129148
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+rWT+++++ +++av++lGg    t+k++ + m+ kg++  ++ks++q+y+
  Rmu_sc0009474.1_g000002.1  78 RLRWTPDLHLCFIHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 129
                                89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVVDKDSQQQ PSSKNGVSSS SSTIEENEKS  60
KGASGGSVRP YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH  120
VKSHLQMYRS KKMEDPNQVL SEQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD  180
ASWHGRHDDH HHQIYSPYSN TGRTQLFDHH NTRVTGLHGS VAERIFGSNN TSTTVLRPQE  240
PVYGCQRRTR LEELVVMLMR ILYVIVSNAI NTVMMVKMIR SSTIFSFHVS TGRFKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.18e-49G2-like family protein