PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009528.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Nin-like

Protein Properties

Length: 954aa MW: 105335 Da PI: 4.8457

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009528.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.1	4.3e-29	577	627	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Rmu_sc0009528.1_g000001.1 577 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 627 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MMSDPEEDRA PAIFPKSKNL DAMDFDIDVS WPLDQIQFLS NPTSPLLFSP ADDPCSPLWA 60 FPDVDHDKLA GGGGRALPDP AQFVSDASPV VEKPRENEDN RMLPSPFSGL DPNPDGYFLI 120 KERITQALRY LKESSDQHVL AQVWAPVKDG SRYVLTTSGQ PFVLDPHDGL HQYRMVSLMY 180 MFSVDGENDG VLGLPGRVFQ QKMPEWTPNV QYYSIKEYPR LDHAQHYNVQ GTLALPIFEP 240 SGRSCIGVIE LIMTSQKINY APEVDKICKA LEAVSLKSSE ILDHTSTQIQ IRNEGRQNAL 300 TEILEILTMV CETHKLPLAQ TWVPCMHRNV LAYGGGMKKS CTSFDGSCME QVCMSTTDVA 360 VYIVDAHMWG FREACVEHHL QKGQGVAGRA FLSRNACFCR DISQFRKTEY PLVHYARMFE 420 LTSSFAICLQ STHTGNDDYI LEFFLPPSIR DSCEQQTLLG SILAIVKDHC QNLKVASGIG 480 LAEEGTVEIV QASINEGLDS RLECIQIPCS MEPLPGSSLP NREEMVRLNP AKPQLMVDID 540 AINDERNAVH NGGKNNISVP ENKDIKKTSE RKRGKTEKSI SLEVLQQYFA GSLKDAAKSL 600 GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKLVIES VQGGEGAFGL SPLTTSPLTG 660 AVGSISRPYT SSQPYEVQGE KKDSPSSSTP GREGQAGIED PLQDIGNGSN SSKTGSGSRE 720 ASTGTPTSHG SCQGSPANGS AMVKDPFVSS IQEQFVEVDR SPESAFRPPE ELYVPVPCSI 780 PDALLMTEPE EPSRGMLLED AGSSKDLRNL CPFTDITVHE QVPEVFWTDP PCPDSAPNQS 840 MSTLAYTMPH NTSLQEMRSV TIKAAYKDDI IRFRISMSSC IVDLKEEVAK RLKLEVGTFD 900 MKYMDDDLEW VLIACDADLQ ECMEICRSSG SNMIRLSVHD ILSNLGSSSE STEE

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MMSDPEEDRA PAIFPKSKNL DAMDFDIDVS WPLDQIQFLS NPTSPLLFSP ADDPCSPLWA  60
FPDVDHDKLA GGGGRALPDP AQFVSDASPV VEKPRENEDN RMLPSPFSGL DPNPDGYFLI  120
KERITQALRY LKESSDQHVL AQVWAPVKDG SRYVLTTSGQ PFVLDPHDGL HQYRMVSLMY  180
MFSVDGENDG VLGLPGRVFQ QKMPEWTPNV QYYSIKEYPR LDHAQHYNVQ GTLALPIFEP  240
SGRSCIGVIE LIMTSQKINY APEVDKICKA LEAVSLKSSE ILDHTSTQIQ IRNEGRQNAL  300
TEILEILTMV CETHKLPLAQ TWVPCMHRNV LAYGGGMKKS CTSFDGSCME QVCMSTTDVA  360
VYIVDAHMWG FREACVEHHL QKGQGVAGRA FLSRNACFCR DISQFRKTEY PLVHYARMFE  420
LTSSFAICLQ STHTGNDDYI LEFFLPPSIR DSCEQQTLLG SILAIVKDHC QNLKVASGIG  480
LAEEGTVEIV QASINEGLDS RLECIQIPCS MEPLPGSSLP NREEMVRLNP AKPQLMVDID  540
AINDERNAVH NGGKNNISVP ENKDIKKTSE RKRGKTEKSI SLEVLQQYFA GSLKDAAKSL  600
GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKLVIES VQGGEGAFGL SPLTTSPLTG  660
AVGSISRPYT SSQPYEVQGE KKDSPSSSTP GREGQAGIED PLQDIGNGSN SSKTGSGSRE  720
ASTGTPTSHG SCQGSPANGS AMVKDPFVSS IQEQFVEVDR SPESAFRPPE ELYVPVPCSI  780
PDALLMTEPE EPSRGMLLED AGSSKDLRNL CPFTDITVHE QVPEVFWTDP PCPDSAPNQS  840
MSTLAYTMPH NTSLQEMRSV TIKAAYKDDI IRFRISMSSC IVDLKEEVAK RLKLEVGTFD  900
MKYMDDDLEW VLIACDADLQ ECMEICRSSG SNMIRLSVHD ILSNLGSSSE STEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein