PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009578.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 134aa    MW: 14660.6 Da    PI: 10.6893
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009578.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox20.77e-072243052
                               HHHHHHHCTS-HHHHHHHHHHHH CS
                   Homeobox 30 reeLAkklgLterqVkvWFqNrR 52
                               +e+LA++lg+  +qV+ WF N R
  Rmu_sc0009578.1_g000001.1  2 KERLAQELGVMAKQVSKWFENAR 24
                               699******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MKERLAQELG VMAKQVSKWF ENARHCVKAG LAVPQAMRKQ PNQAETNIRD ADHDGAQKNE  60
SPGTDDTVAG CCSQDVKDNK LATPKSSKAK TSTPKGRKRK SRLDPGGSDL DEKFKTPPET  120
SKGGRVTRRR KSVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103GRKRKSRL
2127132TRRRKS