PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009615.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 369aa MW: 40941.1 Da PI: 10.0406

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009615.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.3e-31	77	130	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Rmu_sc0009615.1_g000002.1 77 SRLRWTPDLHLCFIHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130 69***************************************************7 PP
2	Myb_DNA-binding	50.7	4e-16	78	129	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ Rmu_sc0009615.1_g000002.1 78 RLRWTPDLHLCFIHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 129 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVVDKDSQQQ PSSKNGVSSS SSTIEENEKS 60 KGASGGSVRQ YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH 120 VKSHLQMYRS KKMEDPNQVL SQQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD 180 ASWRGRHDDD HHQIYSPYSN TGRTQLFDHH NTRVTGLYGS VAERIFGSNN TSTSTTTTTA 240 TTSNNIQSHT THIPSTWRSR HQISTRVHNE VRPFNRQSWQ DHSWLDNSIA TRNTLKRKAP 300 DSSDNTSNLD LNLSLKVPAT EEKVLGFGLS LSLSPASASS KLGLMKKLEG NGGHDREHGR 360 KASTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVVDKDSQQQ PSSKNGVSSS SSTIEENEKS  60
KGASGGSVRQ YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH  120
VKSHLQMYRS KKMEDPNQVL SQQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD  180
ASWRGRHDDD HHQIYSPYSN TGRTQLFDHH NTRVTGLYGS VAERIFGSNN TSTSTTTTTA  240
TTSNNIQSHT THIPSTWRSR HQISTRVHNE VRPFNRQSWQ DHSWLDNSIA TRNTLKRKAP  300
DSSDNTSNLD LNLSLKVPAT EEKVLGFGLS LSLSPASASS KLGLMKKLEG NGGHDREHGR  360
KASTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	9e-46	G2-like family protein