PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009638.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 203aa    MW: 22483.1 Da    PI: 4.7345
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009638.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.48.6e-171983167
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkk 67
                               lppGfrFhPtdeel+++yL+ kv +  +     i+evd++++ePw+Lp+ +++   +   +s++d++
  Rmu_sc0009638.1_g000003.1 19 LPPGFRFHPTDEELITFYLASKVYNGAFCG-VDIAEVDLNRCEPWELPA-LHSMLFKSLLYSHQDQA 83
                               79*************************877.34***************4.33322355566666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MEEVMSELMG REELNEQGLP PGFRFHPTDE ELITFYLASK VYNGAFCGVD IAEVDLNRCE  60
PWELPALHSM LFKSLLYSHQ DQAGTGTSAP KQCKAEAANL SQFQTPPLNA ANFNYLMEKN  120
HSHHQPNVPD SLLQFHHHPR NALSFDDFHY YNGVLGLSTS ATAAVDAETS SASIGGFNRA  180
GFQTMLDPLI KLPAAESWNL DIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.11e-30NAC family protein