PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009650.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 125aa MW: 14660.7 Da PI: 9.8198

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009650.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87	2.9e-27	10	96	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 +fYn+YA+++GFsvrk k+++ +n + + +f+Cskeg++++++ + e+++ r trtgCka+++ ++ ++ w+v++++ eHn Rmu_sc0009650.1_g000010.1 10 EFYNSYATRIGFSVRKGKKRRDAKN-VVRQINFMCSKEGFEQDSDPS-ETKKADRLDTRTGCKAMIRFTLA-EDMWRVSHFHAEHN 92 6***************9999555.5************9999.999****************.9********* PP FAR1 87 Hela 90 H+la Rmu_sc0009650.1_g000010.1 93 HDLA 96 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence
MVCSEVEAYE FYNSYATRIG FSVRKGKKRR DAKNVVRQIN FMCSKEGFEQ DSDPSETKKA 60 DRLDTRTGCK AMIRFTLAED MWRVSHFHAE HNHDLAKPEE RPFLRSNRKM SEAHKGVIKT 120 MRDLV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	31	RKGKKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-17	FAR1 family protein