PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009800.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 348aa MW: 39300.6 Da PI: 7.9665

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009800.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.8e-32	68	121	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ Rmu_sc0009800.1_g000002.1 68 PRLRWTPDLHLRFVHAVERLGGQDRATPKMVLQLMNIKGLSIAHVKSHLQMYRS 121 8****************************************************7 PP
2	Myb_DNA-binding	52.7	9.7e-17	69	120	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k + + m+ kg++ ++ks++q+y+ Rmu_sc0009800.1_g000002.1 69 RLRWTPDLHLRFVHAVERLGGQdraTPKMVLQLMNiKGLSIAHVKSHLQMYR 120 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEGMSGESEC SKTSPSDDRN EEGSESGENY DGEISKPKNN GGSSSNSTVE ESDQKKGSVR 60 PYVRSKMPRL RWTPDLHLRF VHAVERLGGQ DRATPKMVLQ LMNIKGLSIA HVKSHLQMYR 120 SKKIDDAGQV IADQGHHLAE CGDKNIYNLS QLPMLQGYNR SHMSTSFRYG YGDANSWSNS 180 AYENLRHPRI FQGTMTEKLF GSSTTTSNWN STAYSNFRTS SEQVPTWITH TLKDECSQLY 240 NIRRQSLQAH QTRQSLIDHL NPTTHVQPKE KDHFTSLSST PTNLQELKTL KRKASDCDLD 300 LDLSLRLTTK KNDESPRSTT MRDDEVDCTS LSLSLYSPAS AKVRRVEE

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEGMSGESEC SKTSPSDDRN EEGSESGENY DGEISKPKNN GGSSSNSTVE ESDQKKGSVR  60
PYVRSKMPRL RWTPDLHLRF VHAVERLGGQ DRATPKMVLQ LMNIKGLSIA HVKSHLQMYR  120
SKKIDDAGQV IADQGHHLAE CGDKNIYNLS QLPMLQGYNR SHMSTSFRYG YGDANSWSNS  180
AYENLRHPRI FQGTMTEKLF GSSTTTSNWN STAYSNFRTS SEQVPTWITH TLKDECSQLY  240
NIRRQSLQAH QTRQSLIDHL NPTTHVQPKE KDHFTSLSST PTNLQELKTL KRKASDCDLD  300
LDLSLRLTTK KNDESPRSTT MRDDEVDCTS LSLSLYSPAS AKVRRVEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-60	G2-like family protein