PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009825.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 383aa MW: 43615.7 Da PI: 9.7764

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009825.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.6e-08	81	122	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE ++l d+++q+ + + Ia +++ Rt +++k+r+++ Rmu_sc0009825.1_g000003.1 81 WTKEETDQLFDLCQQFDLR-FIVIADRFPSSRTVEELKDRYYS 122 *****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MPAIEPSQLK KRPPSDEKIT WQWLPFTNSA RKDDLQLYHW VRVVNGAPPT GDYSFAKYNK 60 SVDIIKYTDE EYDKYLTDPM WTKEETDQLF DLCQQFDLRF IVIADRFPSS RTVEELKDRY 120 YSVSRHILIA RAASPADVSG HPLVKEPYKV TQEKERKRAL SMVLSQTKNQ ERKDAEVLAE 180 AKRIAESRAR MVARSARELE LPVTFNDERG IVPGESISPL SSTVAPSTSM DNTSTLGTLR 240 LLRVYLRTYA LDQMIIAASS SAGLRTIKRV EQSLQELGVN LKPRVPTKAV CSEHLELRKE 300 ILTLLNLQKE LQYKEADGSS YRDSTYETPG TPKDRTFVPD SMMFGGERVV KRDQKRKGPG 360 RVSEAPSSPA QSKRPRKLKA TDL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MPAIEPSQLK KRPPSDEKIT WQWLPFTNSA RKDDLQLYHW VRVVNGAPPT GDYSFAKYNK  60
SVDIIKYTDE EYDKYLTDPM WTKEETDQLF DLCQQFDLRF IVIADRFPSS RTVEELKDRY  120
YSVSRHILIA RAASPADVSG HPLVKEPYKV TQEKERKRAL SMVLSQTKNQ ERKDAEVLAE  180
AKRIAESRAR MVARSARELE LPVTFNDERG IVPGESISPL SSTVAPSTSM DNTSTLGTLR  240
LLRVYLRTYA LDQMIIAASS SAGLRTIKRV EQSLQELGVN LKPRVPTKAV CSEHLELRKE  300
ILTLLNLQKE LQYKEADGSS YRDSTYETPG TPKDRTFVPD SMMFGGERVV KRDQKRKGPG  360
RVSEAPSSPA QSKRPRKLKA TDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	356	VKRDQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein