PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009869.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 114aa    MW: 13098.9 Da    PI: 9.7488
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009869.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP39.81.6e-1259951450
                        TCP 14 kvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50
                                +g++   v ls + a++f+d+qd+LGfd++sk+i+W
  Rmu_sc0009869.1_g000008.1 59 VQGPKKQEVQLSTQYAIEFYDIQDRLGFDRPSKAIDW 95
                               699********************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MLRRVAGLLL SIPTLKHQTC RPSPSSELQI GSTFQSSRFK EATLFDQLRE KTGTTRLHVQ  60
GPKKQEVQLS TQYAIEFYDI QDRLGFDRPS KAIDWSPTWE TTDLLHRVLH FAGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.22e-13TCP family protein