PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0009991.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 591aa    MW: 67436.9 Da    PI: 7.1847
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0009991.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.3e-10291141097
                                HHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                         B3  10 vlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                                 lk g   lp   ++++g + + +  + l+    g+ W+++l+ + +++r++l+kGW+eF++   L++gD  +F+  +++ +++
  Rmu_sc0009991.1_g000003.1  29 DLKDGKKELPPAAVRKYGDQMADH--IFLKVpNCGKFWKIELRTSPRRDRMWLEKGWEEFASFYLLDQGDLATFSS-EDEHAHF 109
                                566677889********9997775..777774579*******99999999*************************4.3477766 PP

                                EEEEE CS
                         B3  93 vvkvf 97 
                                 +++f
  Rmu_sc0009991.1_g000003.1 110 QIHIF 114
                                77776 PP
2B3352.5e-111952671380
                                TT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                         B3  13 sgrlvlpkkfaeehggkkeesktltledesg.rsWevkliy....rkksgryvltkGWkeFvkangLkegDfv 80 
                                ++r+ +  +fa eh  k+ +  +l+l+++ g r W+v++i     +++ ++++ ++GWk+F ++n+L+egD++
  Rmu_sc0009991.1_g000003.1 195 TNRVFINPEFALEHFCKEGSCCDLSLQNTLGdRIWTVQCISytisDGRMRTVISGAGWKSFRQDNHLEEGDVL 267
                                46799*********77788889******6666*******6667755555558889****************96 PP
3B334.83e-11311396996
                                HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                         B3   9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                                  lk g   lp   ++e+g+       + l+    g+ W+++l+ + +++r++l+kGW+eF++   L++gD+ +F+ +g+ s f
  Rmu_sc0009991.1_g000003.1 311 EDLKDGKKELPPAAVREYGHHL--ADHIYLKVpNCGKHWKIELRTSPRRDRMWLEKGWEEFANFYLLDQGDMATFSSEGEnSHF 392
                                5567777889999*****9774..446888884579*******99999999*************************77755555 PP

                                ..EEEE CS
                         B3  91 elvvkv 96 
                                   v++
  Rmu_sc0009991.1_g000003.1 393 --QVSI 396
                                ..6665 PP
4B350.14.9e-165015891499
                                T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE...EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                         B3  14 grlvlpkkfaeehggkkeesktltledesg.rsWevkliy.rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                                 r+ +   fa+eh +k  +  +ltl++ +g ++W+++++  +++ gr   ++ ++GWk F ++n+L+egD++v+++++  e+++
  Rmu_sc0009991.1_g000003.1 501 FRVFINQAFASEHFYKADTCCDLTLQNNQGdKVWTIQCCSyKRSNGRiqaIISGAGWKAFRQDNHLEEGDVCVLEVIE--ERKC 582
                                4789999******777778889*****9888*******6634444447879999*********************765..6777 PP

                                EEEEE-S CS
                         B3  93 vvkvfrk 99 
                                +v++fr+
  Rmu_sc0009991.1_g000003.1 583 RVSIFRA 589
                                8*99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MGERNRNGKR PAVCEESQGF CLRIQSREDL KDGKKELPPA AVRKYGDQMA DHIFLKVPNC  60
GKFWKIELRT SPRRDRMWLE KGWEEFASFY LLDQGDLATF SSEDEHAHFQ IHIFSWDDME  120
IYYPIRGGGV DVSGPNRKET RVEAEAEAEA EAEARAISIS PRSSADEHQY DISKVSSFRS  180
DKPCLNVQIT ATSLTNRVFI NPEFALEHFC KEGSCCDLSL QNTLGDRIWT VQCISYTISD  240
GRMRTVISGA GWKSFRQDNH LEEGDVLEKR AFKAWTFQLQ MASSSSLAGK GKRHAVQENS  300
PAFCLRIFSR EDLKDGKKEL PPAAVREYGH HLADHIYLKV PNCGKHWKIE LRTSPRRDRM  360
WLEKGWEEFA NFYLLDQGDM ATFSSEGENS HFQVSIYSWD DMEIEYPIRI GGADVSTPDR  420
KEIGAEALAI AISVSPRSSA DERGSAKVRR RRRRVTGSQA EARAISISPR SSADEHEYDV  480
SSFRSDKPFL DIRIPAKTLA FRVFINQAFA SEHFYKADTC CDLTLQNNQG DKVWTIQCCS  540
YKRSNGRIQA IISGAGWKAF RQDNHLEEGD VCVLEVIEER KCRVSIFRAK K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1449454RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.13e-09B3 family protein