PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010191.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 163aa    MW: 18434.4 Da    PI: 10.2372
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010191.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.56e-1057111957
                                HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   9 keqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                ++ +++L+el+ +   r p+ae+++++  +l    +++ + +++WF N+ a+e++
  Rmu_sc0010191.1_g000004.1  57 SNLIRILKELYCNkgVRSPTAEQIQRICLQLkrygKIESKYIFYWFGNHMARERQ 111
                                66789******86679*************************************96 PP
2Wus_type_Homeobox75.86.3e-2555113865
          Wus_type_Homeobox   8 PtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                P ++ i+iL+ely  +G+r+P++e+iqri  +L++yGkie+k +fyWF N+ aRerqk+
  Rmu_sc0010191.1_g000004.1  55 PASNLIRILKELYCnKGVRSPTAEQIQRICLQLKRYGKIESKYIFYWFGNHMARERQKK 113
                                88999********669*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MRILLFLGGS FAMCIAASIC LVRWLSVENT IAAEEAQANS MNLWLFMKKW AATWPASNLI  60
RILKELYCNK GVRSPTAEQI QRICLQLKRY GKIESKYIFY WFGNHMARER QKKRFTSDVH  120
VPMQRSGLIG NGNGTNWKPE DQYINFGSSA SASASSAGVI AFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-23WOX family protein