PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010252.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 119aa MW: 14010.8 Da PI: 10.1928

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010252.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	46.4	6.9e-15	27	89	1	57
TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 rr+R+t+t++q+++L+elF++ r ++ e+ +++ +l +++ ++V++WF N+Ra+ek+ Rmu_sc0010252.1_g000006.1 27 RRSRWTPTTDQIRTLKELFYNkgVRSLTVEQVQRIYLQLkwygKIEFKNVYFWFVNQRAREKQ 89 89****************7789***********************************97 PP
2	Wus_type_Homeobox	80.9	1.6e-26	28	91	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPt++Qi+ L+el++ +G+r+ + e++qri +L+ yGkie kNV++WF N++aRe+qk+ Rmu_sc0010252.1_g000006.1 28 RSRWTPTTDQIRTLKELFYnKGVRSLTVEQVQRIYLQLKWYGKIEFKNVYFWFVNQRAREKQKK 91 79************98769***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence
MEPQTQQPTE DGGSNKSAGS SANMLCRRSR WTPTTDQIRT LKELFYNKGV RSLTVEQVQR 60 IYLQLKWYGK IEFKNVYFWF VNQRAREKQK KTFTSDAHVP MQRSEFVSGS IMEQRGEDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	9e-25	WOX family protein